Scc4a34_13 (supercontig; Medicago sativa )

Overview
NameScc4a34_13
Unique NameScc4a34_13
Typesupercontig
OrganismMedicago sativa (alfalfa)
Sequence length140431
Analyses
This supercontig is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Medicago sativa2016-01-05
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MSAD_210028geneMSAD_210028:22331..23183 +
MSAD_210028.t1mRNAMSAD_210028.t1:22331..23183 +
MSAD_210028.t1:exon:0exonMSAD_210028.t1:exon:0:22331..22525 +
MSAD_210028.t1:exon:1exonMSAD_210028.t1:exon:1:22595..23046 +
MSAD_210028.t1:exon:2exonMSAD_210028.t1:exon:2:23055..23183 +
MSAD_210028.t1:cdsCDSMSAD_210028.t1:cds:22393..22525 +
MSAD_210028.t1:cdsCDSMSAD_210028.t1:cds:22595..23046 +
MSAD_210028.t1:cdsCDSMSAD_210028.t1:cds:23055..23183 +
MSAD_210037geneMSAD_210037:117168..120981 +
MSAD_210037.t1mRNAMSAD_210037.t1:117168..120981 +
MSAD_210037.t1:exon:9exonMSAD_210037.t1:exon:9:117168..117210 +
MSAD_210037.t1:exon:10exonMSAD_210037.t1:exon:10:117719..118293 +
MSAD_210037.t1:exon:11exonMSAD_210037.t1:exon:11:119414..119546 +
MSAD_210037.t1:exon:12exonMSAD_210037.t1:exon:12:120434..120981 +
MSAD_210037.t1:cdsCDSMSAD_210037.t1:cds:117168..117210 +
MSAD_210037.t1:cdsCDSMSAD_210037.t1:cds:117719..118293 +
MSAD_210037.t1:cdsCDSMSAD_210037.t1:cds:119414..119546 +
MSAD_210037.t1:cdsCDSMSAD_210037.t1:cds:120434..120981 +
MSAD_210032geneMSAD_210032:54105..57426 -
MSAD_210032.t1mRNAMSAD_210032.t1:54105..57426 -
MSAD_210032.t1:exon:18exonMSAD_210032.t1:exon:18:57400..57426 -
MSAD_210032.t1:exon:17exonMSAD_210032.t1:exon:17:56811..57284 -
MSAD_210032.t1:exon:16exonMSAD_210032.t1:exon:16:55347..55420 -
MSAD_210032.t1:exon:15exonMSAD_210032.t1:exon:15:55026..55201 -
MSAD_210032.t1:exon:14exonMSAD_210032.t1:exon:14:54402..54476 -
MSAD_210032.t1:exon:13exonMSAD_210032.t1:exon:13:54105..54298 -
MSAD_210032.t1:cdsCDSMSAD_210032.t1:cds:57400..57426 -
MSAD_210032.t1:cdsCDSMSAD_210032.t1:cds:56811..57284 -
MSAD_210032.t1:cdsCDSMSAD_210032.t1:cds:55347..55420 -
MSAD_210032.t1:cdsCDSMSAD_210032.t1:cds:55026..55201 -
MSAD_210032.t1:cdsCDSMSAD_210032.t1:cds:54402..54476 -
MSAD_210032.t1:cdsCDSMSAD_210032.t1:cds:54105..54298 -
MSAD_210038geneMSAD_210038:121546..125006 -
MSAD_210038.t1mRNAMSAD_210038.t1:121546..125006 -
MSAD_210038.t1:exon:25exonMSAD_210038.t1:exon:25:124954..125006 -
MSAD_210038.t1:exon:24exonMSAD_210038.t1:exon:24:124846..124872 -
MSAD_210038.t1:exon:23exonMSAD_210038.t1:exon:23:123743..123842 -
MSAD_210038.t1:exon:22exonMSAD_210038.t1:exon:22:123496..123642 -
MSAD_210038.t1:exon:21exonMSAD_210038.t1:exon:21:122231..122464 -
MSAD_210038.t1:exon:20exonMSAD_210038.t1:exon:20:122015..122160 -
MSAD_210038.t1:exon:19exonMSAD_210038.t1:exon:19:121546..121678 -
MSAD_210038.t1:cdsCDSMSAD_210038.t1:cds:124954..125006 -
MSAD_210038.t1:cdsCDSMSAD_210038.t1:cds:124846..124872 -
MSAD_210038.t1:cdsCDSMSAD_210038.t1:cds:123743..123842 -
MSAD_210038.t1:cdsCDSMSAD_210038.t1:cds:123496..123642 -
MSAD_210038.t1:cdsCDSMSAD_210038.t1:cds:122231..122464 -
MSAD_210038.t1:cdsCDSMSAD_210038.t1:cds:122015..122160 -
MSAD_210038.t1:cdsCDSMSAD_210038.t1:cds:121546..121678 -
MSAD_210025geneMSAD_210025:782..4868 -
MSAD_210025.t1mRNAMSAD_210025.t1:782..4868 -
MSAD_210025.t1:exon:29exonMSAD_210025.t1:exon:29:4790..4868 -
MSAD_210025.t1:exon:28exonMSAD_210025.t1:exon:28:4482..4585 -
MSAD_210025.t1:exon:27exonMSAD_210025.t1:exon:27:1379..1488 -
MSAD_210025.t1:exon:26exonMSAD_210025.t1:exon:26:782..974 -
MSAD_210025.t1:cdsCDSMSAD_210025.t1:cds:4790..4868 -
MSAD_210025.t1:cdsCDSMSAD_210025.t1:cds:4482..4585 -
MSAD_210025.t1:cdsCDSMSAD_210025.t1:cds:1379..1488 -
MSAD_210025.t1:cdsCDSMSAD_210025.t1:cds:782..974 -
MSAD_210029geneMSAD_210029:27615..32648 -
MSAD_210029.t1mRNAMSAD_210029.t1:27615..32648 -
MSAD_210029.t1:exon:31exonMSAD_210029.t1:exon:31:27615..28028 -
MSAD_210029.t1:exon:30exonMSAD_210029.t1:exon:30:32153..32648 -
MSAD_210029.t1:cdsCDSMSAD_210029.t1:cds:32153..32521 -
MSAD_210029.t1:cdsCDSMSAD_210029.t1:cds:27816..28028 -
MSAD_210034geneMSAD_210034:107143..109077 -
MSAD_210034.t1mRNAMSAD_210034.t1:107143..109077 -
MSAD_210034.t1:exon:35exonMSAD_210034.t1:exon:35:108622..109077 -
MSAD_210034.t1:exon:34exonMSAD_210034.t1:exon:34:108086..108159 -
MSAD_210034.t1:exon:33exonMSAD_210034.t1:exon:33:107764..107939 -
MSAD_210034.t1:exon:32exonMSAD_210034.t1:exon:32:107143..107369 -
MSAD_210034.t1:cdsCDSMSAD_210034.t1:cds:108622..109077 -
MSAD_210034.t1:cdsCDSMSAD_210034.t1:cds:108086..108159 -
MSAD_210034.t1:cdsCDSMSAD_210034.t1:cds:107764..107939 -
MSAD_210034.t1:cdsCDSMSAD_210034.t1:cds:107143..107369 -
MSAD_210033geneMSAD_210033:98329..103201 -
MSAD_210033.t1mRNAMSAD_210033.t1:98329..103201 -
MSAD_210033.t1:exon:38exonMSAD_210033.t1:exon:38:102746..103201 -
MSAD_210033.t1:exon:37exonMSAD_210033.t1:exon:37:99246..99342 -
MSAD_210033.t1:exon:36exonMSAD_210033.t1:exon:36:98329..98519 -
MSAD_210033.t1:cdsCDSMSAD_210033.t1:cds:102746..103201 -
MSAD_210033.t1:cdsCDSMSAD_210033.t1:cds:99246..99342 -
MSAD_210033.t1:cdsCDSMSAD_210033.t1:cds:98329..98519 -
MSAD_210027geneMSAD_210027:20764..21303 -
MSAD_210027.t1mRNAMSAD_210027.t1:20764..21303 -
MSAD_210027.t1:exon:39exonMSAD_210027.t1:exon:39:20764..21303 -
MSAD_210027.t1:cdsCDSMSAD_210027.t1:cds:20764..21303 -
MSAD_210039geneMSAD_210039:132250..136494 -
MSAD_210039.t1mRNAMSAD_210039.t1:132250..136494 -
MSAD_210039.t1:exon:47exonMSAD_210039.t1:exon:47:136292..136494 -
MSAD_210039.t1:exon:46exonMSAD_210039.t1:exon:46:136061..136150 -
MSAD_210039.t1:exon:45exonMSAD_210039.t1:exon:45:135632..136045 -
MSAD_210039.t1:exon:44exonMSAD_210039.t1:exon:44:134487..134648 -
MSAD_210039.t1:exon:43exonMSAD_210039.t1:exon:43:134238..134310 -
MSAD_210039.t1:exon:42exonMSAD_210039.t1:exon:42:134015..134120 -
MSAD_210039.t1:exon:41exonMSAD_210039.t1:exon:41:133543..133591 -
MSAD_210039.t1:exon:40exonMSAD_210039.t1:exon:40:132250..132342 -
MSAD_210039.t1:cdsCDSMSAD_210039.t1:cds:136292..136429 -
MSAD_210039.t1:cdsCDSMSAD_210039.t1:cds:136061..136150 -
MSAD_210039.t1:cdsCDSMSAD_210039.t1:cds:135632..136045 -
MSAD_210039.t1:cdsCDSMSAD_210039.t1:cds:134487..134648 -
MSAD_210039.t1:cdsCDSMSAD_210039.t1:cds:134238..134310 -
MSAD_210039.t1:cdsCDSMSAD_210039.t1:cds:134015..134120 -
MSAD_210039.t1:cdsCDSMSAD_210039.t1:cds:133543..133591 -
MSAD_210039.t1:cdsCDSMSAD_210039.t1:cds:132250..132342 -
MSAD_210036geneMSAD_210036:114620..115667 -
MSAD_210036.t1mRNAMSAD_210036.t1:114620..115667 -
MSAD_210036.t1:exon:49exonMSAD_210036.t1:exon:49:115511..115667 -
MSAD_210036.t1:exon:48exonMSAD_210036.t1:exon:48:114620..114819 -
MSAD_210036.t1:cdsCDSMSAD_210036.t1:cds:115511..115667 -
MSAD_210036.t1:cdsCDSMSAD_210036.t1:cds:114620..114819 -
MSAD_210026geneMSAD_210026:10100..11088 -
MSAD_210026.t1mRNAMSAD_210026.t1:10100..11088 -
MSAD_210026.t1:exon:52exonMSAD_210026.t1:exon:52:11016..11088 -
MSAD_210026.t1:exon:51exonMSAD_210026.t1:exon:51:10382..10392 -
MSAD_210026.t1:exon:50exonMSAD_210026.t1:exon:50:10100..10315 -
MSAD_210026.t1:cdsCDSMSAD_210026.t1:cds:11016..11088 -
MSAD_210026.t1:cdsCDSMSAD_210026.t1:cds:10382..10392 -
MSAD_210026.t1:cdsCDSMSAD_210026.t1:cds:10100..10315 -