MSAD_210027.t1 (mRNA; Medicago sativa )

Overview
NameMSAD_210027.t1
Unique NameMSAD_210027.t1
TypemRNA
OrganismMedicago sativa (alfalfa)
Sequence length540
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MSAD_210027MSAD_210027Medicago sativagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
MSAD_210027.t1MSAD_210027.t1-proteinMedicago sativapolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
MSAD_210027.t1:cdsMSAD_210027.t1:cdsMedicago sativaCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
MSAD_210027.t1:exon:39MSAD_210027.t1:exon:39Medicago sativaexon


Synonyms
The feature 'MSAD_210027.t1' has the following synonyms
Synonym
augustus_masked-Scc4a34_13-processed-gene-0.4-mRNA-1
Sequences
The following sequences are available for this feature:

mRNA sequence

>MSAD_210027.t1 ID=MSAD_210027.t1|Name=MSAD_210027.t1|organism=Medicago sativa|type=mRNA|length=540bp
ATGAAATCCACAACACAAACATCATTGTTCATTTTCTTCTTGTGCATCAT
ATTTTATGCTCCTCTTCCAGCAATATCAGTCAGCTTGTATGAATCTTTAT
GCAATGAGTACAGCAACCCTAGCAGCAATATCAAATTATGCTTGAATATA
TTGAAAACTGACCCAGAAATCACCTCAGCCACAAATTACCATGACCTCTC
CTTGTATATCTTGGAGATGGTTCAAAAAGACGCAGCAGCGGTTCAACTTG
ATCTTTTTGAAAAGAGAAAACTTTTTCCCACTGATCCAGCTCTTAACAGT
TGTGTTAATGAATTCTATGAAACAACTATTAATGAATTACAAAAGGCATT
GCGTTTGTTGCCAACTGATCCTCAAACTGCAAGAGATAGTGCAATAGCTG
CTGGTTTTGGAGCTAATAATTGCGAGAAAGCTTTTGAAAAACCAGAGGAA
AAGAATGTTCGTGCTGCAATCCATCTTCGAAACAATGATATCTTTTTTCG
ATGTGTAATTGCATCTTTATCTATAATTCATCTTATGTAG
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protein sequence of MSAD_210027.t1

>MSAD_210027.t1-protein ID=MSAD_210027.t1-protein|Name=MSAD_210027.t1|organism=Medicago sativa|type=polypeptide|length=180bp
MKSTTQTSLFIFFLCIIFYAPLPAISVSLYESLCNEYSNPSSNIKLCLNI
LKTDPEITSATNYHDLSLYILEMVQKDAAAVQLDLFEKRKLFPTDPALNS
CVNEFYETTINELQKALRLLPTDPQTARDSAIAAGFGANNCEKAFEKPEE
KNVRAAIHLRNNDIFFRCVIASLSIIHLM.
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mRNA from alignment at Scc4a34_13:20764..21303-

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSAD_210027.t1 ID=MSAD_210027.t1|Name=MSAD_210027.t1|organism=Medicago sativa|type=mRNA|length=540bp|location=Sequence derived from alignment at Scc4a34_13:20764..21303- (Medicago sativa)
ATGAAATCCACAACACAAACATCATTGTTCATTTTCTTCTTGTGCATCAT ATTTTATGCTCCTCTTCCAGCAATATCAGTCAGCTTGTATGAATCTTTAT GCAATGAGTACAGCAACCCTAGCAGCAATATCAAATTATGCTTGAATATA TTGAAAACTGACCCAGAAATCACCTCAGCCACAAATTACCATGACCTCTC CTTGTATATCTTGGAGATGGTTCAAAAAGACGCAGCAGCGGTTCAACTTG ATCTTTTTGAAAAGAGAAAACTTTTTCCCACTGATCCAGCTCTTAACAGT TGTGTTAATGAATTCTATGAAACAACTATTAATGAATTACAAAAGGCATT GCGTTTGTTGCCAACTGATCCTCAAACTGCAAGAGATAGTGCAATAGCTG CTGGTTTTGGAGCTAATAATTGCGAGAAAGCTTTTGAAAAACCAGAGGAA AAGAATGTTCGTGCTGCAATCCATCTTCGAAACAATGATATCTTTTTTCG ATGTGTAATTGCATCTTTATCTATAATTCATCTTATGTAG
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Coding sequence (CDS) from alignment at Scc4a34_13:20764..21303-

>MSAD_210027.t1 ID=MSAD_210027.t1|Name=MSAD_210027.t1|organism=Medicago sativa|type=CDS|length=540bp|location=Sequence derived from alignment at Scc4a34_13:20764..21303- (Medicago sativa)
ATGAAATCCACAACACAAACATCATTGTTCATTTTCTTCTTGTGCATCAT
ATTTTATGCTCCTCTTCCAGCAATATCAGTCAGCTTGTATGAATCTTTAT
GCAATGAGTACAGCAACCCTAGCAGCAATATCAAATTATGCTTGAATATA
TTGAAAACTGACCCAGAAATCACCTCAGCCACAAATTACCATGACCTCTC
CTTGTATATCTTGGAGATGGTTCAAAAAGACGCAGCAGCGGTTCAACTTG
ATCTTTTTGAAAAGAGAAAACTTTTTCCCACTGATCCAGCTCTTAACAGT
TGTGTTAATGAATTCTATGAAACAACTATTAATGAATTACAAAAGGCATT
GCGTTTGTTGCCAACTGATCCTCAAACTGCAAGAGATAGTGCAATAGCTG
CTGGTTTTGGAGCTAATAATTGCGAGAAAGCTTTTGAAAAACCAGAGGAA
AAGAATGTTCGTGCTGCAATCCATCTTCGAAACAATGATATCTTTTTTCG
ATGTGTAATTGCATCTTTATCTATAATTCATCTTATGTAG
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Properties
Property NameValue
NotePlant invertase/pectin methylesterase inhibitor protein MAKER:6.1:0.37:Medtr6g034800
AED0.37
QI0|-1|0|1|-1|1|1|0|179
eAED0.37
CADL Non-redundant FlagY
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Medicago sativa2016-01-05
Gene Ontology Update2017-11-12
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scc4a34_13supercontigScc4a34_13:20764..21303 -
Gene Ontology
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0004857 enzyme inhibitor activity